Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929557.1_cds_XP_016476827.1_68618
CDS Infomation

[gene=LOC107798366] [db_xref=GeneID:107798366] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016476827.1] [location=join(88370..88602,89750..89879,90001..90242,90656..90874,92477..92636,92758..92831,98908..98998,99451..99529,100827..100898,101586..101746)] [gbkey=CDS]
Sequence

ATGGGGAAGAAAATGGATCGAAGGAGAAATGGGTGTTTGATATTTTCGTTGTTGGTTTTG
GTAGTAGCTGTGAAGGGTGAAAATTTGGTGTTCAATGTGAAGCATAAATATGGTGGGCGT
AATAAAGGGTCGATTTTGAATGATCTTAAAGCGCATGATAGCCGCCGTCACGGCAGAATG
CTCACCTCCGTTGAATTCAAATTGGGTGGCAATGGCTCTCCCACTGATGCCGCGCTCTAT
TACACTAAGTTATCAATTGGAACGCCTTCGAAGGAATATCATGTCCAGGTTGATACTGGC
AGTGACATTTTATGGGTGAACTGTGCTGGCTGTGAGGGATGTCCTACAAAAAGCGATCTC
GGGATAGACTTGGCGTCATATGACTTGAAGGCCTCTACAACTGCAAAATCTGTTTCTTGT
GACGAAGAGTTTTGCATGCTTAATACTCCCTACTCGGATTGCAAGGTGGGAATGCCATGT
GATTATCAGGTTAGTTATGGAGATGGAAGCTCAACCTCAGGATTCTTTGTAAAGGATGAT
ATTCGGTTTGATCAAGTGTCAGGAGACCTAAAAACAACATCTATGAACGGGTCTATAGCA
TTTGGGTGCTCGTCTAGACAAGAACTAAGTAATCCTAGTCAAGCAGTTGATGGAATACTT
GGTTTTGGACAAGCAAGTTCATCAGTTATTTCGCAGCTAGCTGCAGCCGGGAAGGTGAAG
AAAATATTTGCACATTGCCTAGATGGAAAGAATGGAGGTGGCATATTTACCATTGGACAA
GTAGTTCAGCCAAAAGTAAATTCAACTCCACTAGTCCCCGATTTGCCACATTATAATGTT
GTTATGAAAGGAATTGAGGTTGGTGGTGAAGTTCTAGACATTCCCACAACCATCTTCAAC
ACGAAATCCAGTATGACAATAATTGACAGTGGCACAACCTTAGCATATCTTCCGAACATG
GTCTACAGTGCTCTCATCTACAAGTTGATGGAACGGCAACCACAGTTGAATATTCGTCTT
GTTGAGGAGAGTTTCCACTGCTTTGACTACACCGGGAAGATTGATGATGGATTCCCAGTT
GTAACATTCCGCTTTGCAGATTCGCTTTCTTTGACAGTTTATCCCCACGATTATCTTTTC
CAAGTCACAGAGAGTCGATGGTGTATTGGTTGGCAAGACAGTGGAGGAATGCAGGCAAAG
GATGGAATGACAATAACTCTGTTAGGAGATCTTGTGTTATCAAACAAGCTAGTTCTGTAT
GATATCGAAAACCAGACCATTGGTTGGATCGAGTACGACTGCTCTTCAACCATCCAACTC
AAATATGAAAGCTCTGGAAGTGCTGGAAGCGCGTATACTGTGGCTTCTCACGATATTTCA
TCATCTTCTATTGTGGATTCAAGGAAGGGTTTTACATTCTTTTTTTTAATCATTTCCATC
CTGTATAATTTGTTGAAGTGA

Peptide Sequence

PEP ID

XP_016476827.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MGKKMDRRRNGCLIFSLLVLVVAVKGENLVFNVKHKYGGRNKGSILNDLKAHDSRRHGRM
LTSVEFKLGGNGSPTDAALYYTKLSIGTPSKEYHVQVDTGSDILWVNCAGCEGCPTKSDL
GIDLASYDLKASTTAKSVSCDEEFCMLNTPYSDCKVGMPCDYQVSYGDGSSTSGFFVKDD
IRFDQVSGDLKTTSMNGSIAFGCSSRQELSNPSQAVDGILGFGQASSSVISQLAAAGKVK
KIFAHCLDGKNGGGIFTIGQVVQPKVNSTPLVPDLPHYNVVMKGIEVGGEVLDIPTTIFN
TKSSMTIIDSGTTLAYLPNMVYSALIYKLMERQPQLNIRLVEESFHCFDYTGKIDDGFPV
VTFRFADSLSLTVYPHDYLFQVTESRWCIGWQDSGGMQAKDGMTITLLGDLVLSNKLVLY
DIENQTIGWIEYDCSSTIQLKYESSGSAGSAYTVASHDISSSSIVDSRKGFTFFFLIISI
LYNLLK

Transcript Sequence

Gene sequence data has not been registered.